Currently Post-doctoral Researcher at iDiv in Leipzig working with Marten Winter. Interested in, among others things, Macroecology, Functional diversity, Open and Reproducible Science. These days studying the distribution of exotic plant species.
PhD in Ecology, 2020
Université de Montpellier – Centre d'Écologie Fonctionnelle et Évolutive
MSc in General Biology (minors in Evolutionary Biology, Ecology and Modelling), 2015
École Normale Supérieure de Lyon – Université Claude Bernard Lyon 1
BSc in General Biology (minors in Evolutionary Biology, Ecology and Modelling), 2013
École Normale Supérieure de Lyon – Université Claude Bernard Lyon 1
Preprint PDF Code Dataset Project Project DOI Shiny Application
PDF Code Project Project Project DOI: 10.1111/ele.13778 GitHub
You can find a list of the packages I heavily contributed on my R-universe.
Package Name | Package Status | Description |
---|---|---|
ecolottery |
an R package to simulate community assembly using coalescent theory | |
funrar |
Compute functional rarity indices (see more at https://rekyt.github.io/funrar/) | |
rromeo |
R client to SHERPA/RoMEO the database on journal archival policies (see more at https://ropensci.github.io/rromeo/) | |
fundiversity |
Fast and modular computation of functional diversity indices | |
funbiogeo |
A package to help functional biogeography analyses | |
rtaxref |
R client to the French Taxonomic Reference (see more at https://rekyt.github.io/rtaxref) | |
bnfimage |
R client to the French National Library (BnF) Image API |
Studying the distribution of species attribute diversity
Large-scale study of biodiversity to achieve generalization
Create and contribute to new tools to advance biodiversity science
What are the ecological and evolutionary mechanisms explaining functional rarity and functional originality?
I gave more than 80 hours of courses at the different universities I’ve worked in:
Course name | Level | Total time |
---|---|---|
Descriptive Statistics with R (UM) |
Bachelor’s (2nd yr) |
50h |
Functional Biogeography with R (UM, material) |
Master’s (2nd yr) |
8h |
Guest Lecture on Biodiversity Facets (UL) |
Master’s (1st yr) |
2h |
Biodiversity Facets with R (UL, material) |
Master’s (1st yr) |
6h |
Group project on Biodiversity Facets (UL) |
Master’s (1st yr) |
20h |
Introduction to git and GitHub (UL/iDiv, material) |
PhD students and postdocs |
10h |
UM: University of Montpellier; UL: University of Leipzig
I am a certified Instructor for The Carpentries, focusing on R programming (especially for ecology) and Data Visualization.
I also founded the R User Group at the Center for Functional and Evolutionary Ecology in Montpellier. There, I organized regular 1h meet-ups on various R topics (plotting with ggplot2
, mapping with sf
, project organization with RStudio, workflow organization with drake
, parallelization with future
).